PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_02116.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 195aa    MW: 22100.9 Da    PI: 10.2631
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_02116.1_g00001.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.92.6e-14123182160
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                              e+e+ r +r+ +NR++A+r R+RKk ++ eLe+kv  Lea+N++L ++l++l+ke   l+
  Rsa1.0_02116.1_g00001.1 123 ERESSRLKRLLRNRVSAQRARERKKVYVNELEKKVNDLEAKNTELEERLSTLQKENHMLR 182
                              78999*************************************************998776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001707.0E-14123184IPR004827Basic-leucine zipper domain
SMARTSM003381.4E-14123187IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.576125188IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-13128185No hitNo description
Gene3DG3DSA:1.20.5.1704.1E-17128185No hitNo description
CDDcd147042.00E-17128179No hitNo description
PROSITE patternPS000360130145IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MKWKIHHIKV ECGGRYEYSI SDLGPLAQFS TVGSVIQFSR SGHLSSTSSQ PMALTPSTIQ  60
ATDLMTTERF SDSVLRLHVK QDSDNEIGEI HDLDAGEQSL TGSEGVKLLG QGQRRRRGKE  120
PAERESSRLK RLLRNRVSAQ RARERKKVYV NELEKKVNDL EAKNTELEER LSTLQKENHM  180
LRHIIKNTSS SSSSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010525968.14e-49PREDICTED: transcription factor HY5-like
SwissprotQ9SM501e-35HY5_SOLLC; Transcription factor HY5
TrEMBLV4NJV01e-42V4NJV0_EUTSA; Uncharacterized protein (Fragment)
STRINGVIT_04s0008g05210.t013e-34(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM56912749
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.15e-21bZIP family protein